BioResearchAgent

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Task B1 · evidence aggregation

What experimental evidence in the corpus supports a mechanistic link between mutant p53 and immune suppression?

Gold evidence

Acceptable answer concepts

  • mutant p53 binds TBK1
  • blocks STING-TBK1-IRF3 axis
  • immune evasion

Construction note

Directly restates the mechanism described in PMID:42700791's abstract (mutp53 binding TBK1, blocking STING-TBK1-IRF3 signaling).

How each architecture answered

Baseline 0 · no retrieval

Yuu no Sekai · 435 tokens · 2.7s

(abstained) No experimental evidence was retrieved to support a mechanistic link between mutant p53 and immune suppression.

abstentionverifiedconf 1.00

There is no experimental evidence in the corpus supporting a mechanistic link between mutant p53 and immune suppression.

run_failed: 0abstention_correct: 0%concept_coverage: 0%

Baseline 1 · retrieve + synthesize

Yuu no Sekai · 2545 tokens · 6.5s
query(ies): What experimental evidence in the corpus supports a mechanistic link between mutant p53 and immune suppression?

Experimental evidence from the corpus supports a mechanistic link between mutant p53 and immune suppression through its interaction with TANK-binding kinase 1 (TBK1). This interaction blocks the formation of the STING-TBK1-interferon regulatory factor 3 (IRF3) signaling complex, which is essential for inducing Type I interferon (IFN-I) production. As a result, the anti-tumor immune response is weakened.

factualverifiedconf 0.95

Mutant p53 suppresses the immune system by binding to TANK-binding kinase 1 (TBK1).

PMID:42700791Direct support
factualverifiedconf 0.95

The interaction between mutant p53 and TBK1 blocks the formation of the STING-TBK1-IRF3 signaling complex.

PMID:42700791Direct support
factualverifiedconf 0.95

This interaction leads to weakened anti-tumor immune response by inhibiting Type I interferon (IFN-I) production.

PMID:42700791Direct support
run_failed: 0retrieval_recall_at_k: 100%retrieval_mrr: 100%claim_support_rate: 100%unsupported_claim_rate: 0%citation_precision: 100%source_validity_rate: 100%abstention_correct: 100%concept_coverage: 67%

Agent 1 · planner + retrieve + synthesize

Yuu no Sekai · 2638 tokens · 7.3s
query(ies): mechanistic link mutant p53 immune suppression | experimental evidence mutant p53 immune system | mutant p53 immune cell function
planner → {"queries": ["mechanistic link mutant p53 immune suppression", "experimental evidence mutant p53 immune system", "mutant p53 immune cell function"]}

Experimental evidence from the corpus supports a mechanistic link between mutant p53 and immune suppression by showing that mutant p53 suppresses the immune system by binding to TANK-binding kinase 1 (TBK1), blocking the formation of the STING-TBK1-IRF3 signaling complex, which is essential for inducing Type I interferon (IFN-I) production, thereby weakening the anti-tumor immune response.

factualverifiedconf 0.95

Mutant p53 suppresses the immune system by binding to TANK-binding kinase 1 (TBK1).

PMID:42700791Direct support
factualverifiedconf 0.95

The interaction between mutant p53 and TBK1 blocks the formation of the STING-TBK1-IRF3 signaling complex.

PMID:42700791Direct support
factualverifiedconf 0.95

This blockage inhibits Type I interferon (IFN-I) production, leading to a weakened anti-tumor immune response.

PMID:42700791Direct support
run_failed: 0retrieval_recall_at_k: 100%retrieval_mrr: 100%claim_support_rate: 100%unsupported_claim_rate: 0%citation_precision: 100%source_validity_rate: 100%abstention_correct: 100%concept_coverage: 67%